ADMET Lead Desk -- frozen database

Score matrix used for IBM Fez job d9lpnanbupns73e7qujg (schema admet_lead_desk_v1). Values are desirability in [0, 1]: higher means more favorable for advancing an oral small-molecule lead under that logic.

Public-proxy panel for architecture comparison. Not a claim that every cell is a TDC experimental assay label for that compound. Endpoint names follow the Therapeutics Data Commons ADMET Benchmark Group (17 of 22). Source overview: tdcommons.ai

Compounds (assets)

IDNameClassRole in the conflict
1caffeinecns_toolGenerally favorable oral / CNS tool profile
2propranololcardiovascularLipophilic beta-blocker; CYP / P-gp tension
3digoxincardiovascularP-gp substrate / narrow therapeutic index
4ibuprofennsaidStrong oral NSAID; moderate DILI tension
5cisplatinoncologyPoor oral ADME; high toxicity
6doxorubicinoncologyCardiotoxicity / poor BBB
7fluoxetinecnsCNS exposure with CYP2D6 liability
8terfenadinewithdrawnhERG / CYP3A4 poster child
9acetaminophenanalgesicStrong ADME; DILI risk at overdose (filter trap)

Seventeen contextures (columns)

#ColumnFamilyTDC-aligned meaningDesirability
0caco2AbsorptionCaco-2 permeabilityHigher permeability better
1hiaAbsorptionHuman intestinal absorptionAbsorbed better
2pgpAbsorptionP-gp liabilityLow P-gp risk better
3bioavailabilityAbsorptionOral bioavailabilityHigher F better
4lipophilicityAbsorptionDrug-like lipophilicityBalanced better
5solubilityAbsorptionAqueous solubilityHigher better
6bbbDistributionBBB permeationPermeant higher (panel mixes intents)
7ppbrDistributionPlasma protein binding balanceModerate preferred
8vdssDistributionVolume of distribution balanceModerate preferred
9cyp2c9_inhMetabolismCYP2C9 inhibitionNon-inhibitor better
10cyp2d6_inhMetabolismCYP2D6 inhibitionNon-inhibitor better
11cyp3a4_inhMetabolismCYP3A4 inhibitionNon-inhibitor better
12half_lifeExcretionHalf-life balanceModerate preferred
13cl_hepaExcretionHepatocyte clearance balanceModerate preferred
14hergToxicityhERG blockadeNon-blocker better
15amesToxicityAmes mutagenicityNon-mutagen better
16diliToxicityDILI riskLow risk better

Frozen desirability matrix (IBM job table)

IDName caco2hiapgpFliposol bbbppbrvdss 2c92d63a4 t1/2CLh hERGAmesDILI
1caffeine0.880.920.850.900.780.820.900.750.700.880.850.800.720.700.880.900.85
2propranolol0.800.850.550.780.700.550.820.600.650.700.450.550.680.600.720.880.75
3digoxin0.350.400.150.300.450.500.200.550.400.800.750.700.550.500.650.850.55
4ibuprofen0.850.900.800.880.720.480.550.500.600.550.700.600.650.550.800.880.60
5cisplatin0.100.080.700.050.250.700.050.700.350.850.850.800.400.350.550.450.15
6doxorubicin0.200.150.350.100.400.450.080.400.450.650.600.550.500.400.250.500.20
7fluoxetine0.750.820.500.800.680.400.880.450.700.600.200.500.750.550.700.850.70
8terfenadine0.700.780.400.650.550.350.450.400.550.500.550.150.600.500.080.800.55
9acetaminophen0.900.950.880.920.800.850.700.780.650.900.880.850.700.650.900.880.35

Classical sequential gates used on this table

Survivors require: hERG ≥ 0.55, Ames ≥ 0.55, DILI ≥ 0.50, P-gp ≥ 0.45, bioavailability ≥ 0.45. On this matrix that keeps caffeine, propranolol, ibuprofen, fluoxetine -- and drops acetaminophen despite a high equal-weight score.